Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial lipid a biosynthesis acyltransferase family protein | D560_1263 | P0ACV1 | Positive | 1194726 - 1195580 | 31559.6 |
| bacterial lipid a biosynthesis acyltransferase family protein | D560_1264 | P0ACV1 | Positive | 1195577 - 1196470 | 33542.4 |
| diaminopimelate epimerase | D560_1265 | B2AGE5 | Positive | 1196532 - 1197389 | 30582.4 |
| hypothetical protein | D560_1266 | Not Available | Positive | 1197414 - 1198082 | 24209.5 |
| tyrosine recombinase xerc | D560_1267 | Q8Y3C8 | Positive | 1198089 - 1199057 | 35173.2 |
| tonb dependent receptor family protein | D560_1268 | Q9JZN9 | Negative | 1199063 - 1200655 | 58815.4 |
| high-affinity nickel-transport family protein | D560_1269 | P44136 | Negative | 1201194 - 1202108 | 31787.4 |
| hypothetical protein | D560_1270 | Not Available | Negative | 1202132 - 1202716 | 21492.3 |
| periplasmic solute binding family protein | D560_1271 | Q8Y653 | Negative | 1202758 - 1203738 | 35133.9 |
| abc 3 transport family protein | D560_1272 | P42361 | Negative | 1203768 - 1204643 | 30279.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




