Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | D560_1243 | A0R3H2 | Positive | 1178690 - 1179367 | 24354.2 |
| udp-n-acetylmuramate dehydrogenase domain protein | D560_1244 | Q55587 | Positive | 1179602 - 1180045 | 17003.2 |
| hypothetical protein | D560_1245 | Q55587 | Positive | 1180005 - 1181027 | 37465.9 |
| a predicted alpha-helical domain with a conserved er motif family protein | D560_1246 | P9WL96 | Positive | 1181030 - 1181962 | 35542.4 |
| transglutaminase-like superfamily protein | D560_1247 | Q49757 | Positive | 1181976 - 1182779 | 29478.9 |
| proteasome a-type/b-type family protein | D560_1248 | Not Available | Positive | 1182812 - 1183675 | 31901.1 |
| helix-turn-helix family protein | D560_1249 | P37007 | Positive | 1183774 - 1184724 | 35689.8 |
| doxx family protein | D560_1250 | P44270 | Negative | 1184721 - 1185200 | 17557.7 |
| hypothetical protein | D560_1251 | Not Available | Negative | 1185163 - 1185435 | 10245.2 |
| hypothetical protein | D560_1252 | A3QF58 | Negative | 1185399 - 1185857 | 17193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




