Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_1233 | Not Available | Negative | 1167667 - 1168065 | 15058.2 |
| ferric uptake regulator family protein | D560_1234 | P0A3E4 | Negative | 1168062 - 1168493 | 15953.3 |
| bacterial regulatory helix-turn-helix s, arac family protein | D560_1235 | P76241 | Positive | 1168698 - 1169351 | 23746.8 |
| mta/sah nucleosidase | D560_1236 | A6VPH1 | Positive | 1169335 - 1170126 | 28018.8 |
| uracil-dna glycosylase | D560_1237 | Q2L0Y2 | Positive | 1170149 - 1170907 | 27373.9 |
| helicase conserved c-terminal domain protein | D560_1238 | P25888 | Positive | 1171171 - 1172829 | 60917.9 |
| transposase family protein | D560_1239 | Q06126 | Positive | 1172960 - 1174180 | 47435.5 |
| s-adenosyl-l-methionine-dependent methyltransferase family protein | D560_1240 | Q08BY0 | Positive | 1174242 - 1175420 | 42588.8 |
| poly a polymerase head domain protein | D560_1241 | Q7U367 | Negative | 1175439 - 1176533 | 39515.6 |
| transglycosylase slt domain protein | D560_1242 | P39434 | Negative | 1176530 - 1178566 | 75547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




