Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D560_1203 | Q6ACU3 | Negative | 1143080 - 1143565 | 17089.5 |
| transcriptional regulator, lysr family | D560_1204 | P67666 | Negative | 1143581 - 1144519 | 34380.2 |
| lyse type translocator family protein | D560_1205 | P64904 | Positive | 1145050 - 1145325 | 9626.06 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1206 | P0A9F8 | Positive | 1145385 - 1146290 | 33322.2 |
| hypothetical protein | D560_1207 | Not Available | Negative | 1146402 - 1146608 | 7548.92 |
| receptor ligand binding region family protein | D560_1208 | P21175 | Positive | 1146579 - 1147709 | 40339.3 |
| branched-chain amino acid transport system / permease component family protein | D560_1209 | P0AEX8 | Positive | 1147802 - 1148674 | 30468.6 |
| branched-chain amino acid transport system / permease component family protein | D560_1210 | P0A194 | Positive | 1148710 - 1150602 | 67373.6 |
| abc transporter family protein | D560_1211 | P21630 | Positive | 1150621 - 1151343 | 25641.5 |
| cyclic nucleotide-binding domain protein | D560_1212 | Q5SIL0 | Negative | 1151391 - 1151933 | 19694.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




