Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | D560_1173 | Q7WQS2 | Positive | 1114249 - 1115142 | 33185.8 |
| tram domain protein | D560_1174 | Q7WQS2 | Positive | 1115152 - 1115487 | 12265.2 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1175 | P52696 | Negative | 1115526 - 1116416 | 32536.8 |
| succinate-semialdehyde dehydrogenase | D560_1176 | Q88RC0 | Positive | 1116604 - 1118073 | 52049.4 |
| fad binding domain protein | D560_1177 | Q988C9 | Positive | 1118081 - 1118413 | 11573.6 |
| gmc oxidoreductase family protein | D560_1178 | A7X6Z3 | Positive | 1118443 - 1119435 | 36193.8 |
| periplasmic binding domain protein | D560_1179 | Q9HUQ0 | Positive | 1119498 - 1119917 | 14340.0 |
| hypothetical protein | D560_1180 | Not Available | Positive | 1119928 - 1120506 | 21388.6 |
| had hydrolase, ia, variant 1 family protein | D560_1181 | Q55039 | Positive | 1120503 - 1121135 | 23200.1 |
| pyridoxamine 5'-phosphate oxidase, fmn-binding family protein | D560_1182 | Not Available | Positive | 1121148 - 1121774 | 22746.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




