Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase b | D560_1163 | Q7MGK4 | Negative | 1104352 - 1105683 | 47656.1 |
| acyl-coa dehydrogenase, c-terminal domain protein | D560_1164 | P16219 | Negative | 1105783 - 1106931 | 41388.7 |
| tripartite tricarboxylate transporter receptor family protein | D560_1165 | Q44018 | Negative | 1106961 - 1107920 | 33927.5 |
| transposase family protein | D560_1166 | Q06126 | Positive | 1108083 - 1109303 | 47435.5 |
| short chain dehydrogenase family protein | D560_1167 | Q9KQH7 | Positive | 1109430 - 1110170 | 25864.2 |
| cyclase family protein | D560_1168 | Not Available | Positive | 1110167 - 1111213 | 38165.7 |
| amp-binding enzyme family protein | D560_1169 | Q7WSH3 | Positive | 1111223 - 1112431 | 43798.6 |
| hypothetical protein | D560_1170 | Q0P4F7 | Positive | 1112452 - 1112817 | 13264.9 |
| deor-like helix-turn-helix domain protein | D560_1171 | O34817 | Positive | 1112840 - 1113583 | 27580.3 |
| helix-turn-helix family protein | D560_1172 | Q9KMA5 | Positive | 1113764 - 1114009 | 9026.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




