Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spou rrna methylase family protein | D560_1153 | A3NR15 | Negative | 1094277 - 1094747 | 17112.5 |
| phosphoribosyl transferase domain protein | D560_1154 | Q8ZLI8 | Negative | 1094773 - 1095405 | 22531.8 |
| methyltransferase domain protein | D560_1155 | C1D5S5 | Positive | 1095597 - 1096523 | 33437.3 |
| carboxylate-amine ligase ybdk | D560_1156 | Q2L0C4 | Negative | 1096534 - 1097775 | 45942.8 |
| cation transport family protein | D560_1157 | E1V6C5 | Negative | 1098160 - 1099629 | 53210.5 |
| nad-dependent glycerol-3-phosphate dehydrogenase family protein | D560_1158 | E1V6C6 | Negative | 1099658 - 1100437 | 28701.6 |
| nadp oxidoreductase coenzyme f420-dependent family protein | D560_1159 | P71354 | Negative | 1100434 - 1100733 | 10307.5 |
| response regulator | D560_1160 | Q04849 | Negative | 1100730 - 1101419 | 25225.4 |
| hamp domain protein | D560_1161 | Q04850 | Negative | 1101431 - 1103716 | 82771.9 |
| hypothetical protein | D560_1162 | Not Available | Negative | 1103725 - 1104309 | 21985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




