Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | D560_1113 | D0ZEW1 | Positive | 1051834 - 1054902 | 110223.0 |
| export membrane family protein | D560_1114 | B5RBW9 | Positive | 1054899 - 1056539 | 57610.8 |
| acrb/acrd/acrf family protein | D560_1115 | A7ZNP9 | Positive | 1056555 - 1057949 | 50896.5 |
| calcineurin-like phosphoesterase family protein | D560_1116 | Not Available | Positive | 1057978 - 1058811 | 30793.5 |
| antisigma-factor antagonist, stas | D560_1117 | P55189 | Negative | 1058808 - 1060286 | 52405.3 |
| muconate cycloisomerase 1 | D560_1118 | O33946 | Positive | 1060835 - 1061878 | 37206.9 |
| catechol 1,2-dioxygenase | D560_1119 | O33948 | Positive | 1061928 - 1062863 | 33683.7 |
| sugar (and other) transporter family protein | D560_1120 | E8ZB61 | Positive | 1062949 - 1064292 | 46384.5 |
| short chain dehydrogenase family protein | D560_1121 | P07772 | Positive | 1064308 - 1065087 | 28036.3 |
| integrase core domain protein | D560_1122 | P37007 | Positive | 1065186 - 1066136 | 35701.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




