Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monothiol glutaredoxin, grx4 family | D560_1103 | Q02784 | Negative | 1042189 - 1042515 | 11797.1 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | D560_1104 | Q7W022 | Negative | 1042556 - 1043365 | 29059.8 |
| peptide chain release factor 1 | D560_1105 | Q2KZZ3 | Negative | 1043371 - 1044453 | 40174.6 |
| glutamyl-trna reductase | D560_1106 | Q2KZZ5 | Negative | 1044535 - 1045809 | 46586.3 |
| Trna-phe | Not Available | Not Available | Positive | 1046009 - 1046084 | Not Available |
| rna polymerase sigma factor, sigma-70 family protein | D560_1108 | P23484 | Positive | 1046454 - 1046933 | 17885.7 |
| fecr family protein | D560_1109 | P23485 | Positive | 1046938 - 1047900 | 35083.6 |
| tonb-dependent siderophore receptor family protein | D560_1110 | P38047 | Positive | 1048055 - 1050574 | 91649.4 |
| efflux transporter, rnd family, mfp subunit | D560_1111 | C5BHN6 | Positive | 1050701 - 1051438 | 26195.3 |
| hlyd secretion family protein | D560_1112 | C9XVZ5 | Positive | 1051517 - 1051837 | 11532.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




