Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | D560_1033 | O35083 | Positive | 977375 - 978103 | 27550.0 |
| hypothetical protein | D560_1034 | Not Available | Positive | 978090 - 978923 | 30996.2 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_1035 | Q47005 | Positive | 978928 - 979482 | 20195.8 |
| lysr substrate binding domain protein | D560_1036 | O06703 | Positive | 979464 - 979853 | 13720.7 |
| fad binding domain protein | D560_1037 | Q9Z4P0 | Positive | 979932 - 981347 | 51188.2 |
| citrate utilization b domain protein | D560_1038 | P05853 | Positive | 981442 - 981876 | 15916.2 |
| putative citrate utilization protein b | D560_1039 | P37463 | Positive | 981876 - 982415 | 19295.8 |
| lactoylglutathione lyase | D560_1040 | P0A0T2 | Positive | 982529 - 982924 | 14851.6 |
| peptide deformylase | D560_1041 | Q7W0Q0 | Positive | 982930 - 983463 | 19873.7 |
| hypothetical protein | D560_1042 | Not Available | Negative | 983477 - 983686 | 7377.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




