Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter receptor family protein | D560_1023 | P0A177 | Positive | 968467 - 969414 | 33181.8 |
| deor-like helix-turn-helix domain protein | D560_1024 | Q82IW0 | Positive | 969436 - 970212 | 27975.7 |
| aconitase family protein | D560_1025 | O27668 | Positive | 970225 - 970638 | 14909.0 |
| aconitase family protein | D560_1026 | Q2RG98 | Positive | 970650 - 971546 | 31826.7 |
| 2,3-dimethylmalate lyase | D560_1027 | Q0QLE4 | Positive | 971543 - 972406 | 30659.6 |
| major facilitator superfamily protein | D560_1028 | O07569 | Negative | 972397 - 973593 | 40720.9 |
| hypothetical protein | D560_1029 | Not Available | Negative | 973568 - 973804 | 8368.33 |
| glycine--trna ligase, alpha subunit | D560_1030 | Q7W0Q6 | Positive | 973787 - 974698 | 34236.4 |
| glycine--trna ligase, beta subunit | D560_1031 | A6SV18 | Positive | 974700 - 976835 | 76135.7 |
| had hydrolase, family iiia domain protein | D560_1032 | Q7WG29 | Positive | 976832 - 977371 | 19139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




