Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase, class ii | D560_1003 | Q7W0A2 | Negative | 947690 - 948967 | 44797.8 |
| hypothetical protein | D560_1004 | Not Available | Positive | 948992 - 949141 | 5741.95 |
| trna threonylcarbamoyl adenosine modification protein yjee | D560_1005 | P0AF68 | Positive | 949230 - 949763 | 19388.0 |
| n-acetylmuramoyl-l-alanine amidase amic | D560_1006 | P63884 | Positive | 949790 - 951070 | 46657.2 |
| hypothetical protein | D560_1007 | P0ABP7 | Negative | 951146 - 951778 | 22823.5 |
| dna mismatch repair mutl family protein | D560_1008 | Q2KX20 | Positive | 951898 - 953751 | 67207.2 |
| trna dimethylallyltransferase | D560_1009 | Q2KX23 | Positive | 953748 - 954704 | 34389.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | D560_1010 | Q2KX26 | Negative | 954757 - 955806 | 36623.3 |
| dnaa regulatory inactivator hda | D560_1011 | A7ML17 | Positive | 956061 - 956756 | 24949.2 |
| had phosphoserine phosphatase-like hydrolase, ib family protein | D560_1012 | Q9I6F6 | Positive | 956753 - 957451 | 25948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




