Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chac-like family protein | D560_0993 | P39163 | Positive | 939021 - 939482 | 17054.6 |
| pyridoxamine 5'-phosphate oxidase | D560_0994 | Q2KVR0 | Positive | 939553 - 940185 | 24065.2 |
| flavin reductase like domain protein | D560_0995 | Q6Q271 | Positive | 940262 - 940699 | 15711.5 |
| putative conserved exported protein | D560_0996 | A0A0M7LBC1 | Positive | 940705 - 941814 | 38801.6 |
| formyltetrahydrofolate deformylase | D560_0997 | Q46339 | Positive | 941843 - 942697 | 31855.1 |
| gamma-glutamyltransferase | D560_0998 | P54422 | Negative | 942707 - 944443 | 61371.4 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0999 | P0DV33 | Positive | 944541 - 945440 | 32256.2 |
| tripartite tricarboxylate transporter receptor family protein | D560_1000 | P0A177 | Negative | 945541 - 946521 | 34374.4 |
| putative transporter domain protein | D560_1001 | Not Available | Positive | 946766 - 946984 | 7846.92 |
| membrane transport family protein | D560_1002 | O27435 | Positive | 946997 - 947635 | 21783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




