Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Bordetella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Bordetella |
| Species | Bordetella holmesii |
| Strain | 5589, F5101 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
688505 bp
Thymine Count
691897 bp
Guanine Count
1157119 bp
Cytosine Count
1162153 bp
Genome Length
3699674 bp
Protein-coding Genes
3912 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase family protein | D560_0092 | D3KVM6 | Positive | 83270 - 83818 | 20061.2 |
| dodecin family protein | D560_0093 | A1WUH0 | Negative | 84539 - 84757 | 8242.82 |
| lysr family transcriptional regulator domain protein | D560_0094 | Not Available | Negative | 84823 - 84954 | 4926.04 |
| bacterial regulatory helix-turn-helix, lysr family protein | D560_0095 | P52689 | Negative | 85064 - 85837 | 28443.3 |
| zinc-binding alcohol dehydrogenase family protein | D560_0096 | P63475 | Positive | 85827 - 86846 | 36762.1 |
| lpxtg cell wall anchor domain protein | D560_0097 | Not Available | Negative | 86843 - 87109 | 9253.57 |
| dna mismatch repair protein muts | D560_0098 | Q2KWZ4 | Positive | 87724 - 90318 | 94185.0 |
| cupin superfamily protein | D560_0099 | P27431 | Positive | 90315 - 91502 | 43770.4 |
| nlpb/dapx lipofamily protein | D560_0100 | Q3SJU7 | Negative | 92064 - 93182 | 40997.0 |
| dihydrodipicolinate synthase | D560_0101 | Q7VXZ8 | Negative | 93200 - 94105 | 31800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




