Chitinimonas koreensis R2A43-10, R2A 43-10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chitinibacteraceae

Genus

Chitinimonas

Description

Chitinimonas koreensis R2A43-10 is a bacterial strain characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number CP060704.1, which provides a unique identifier for genomic studies and further research. Chitinimonas koreensis is known for its potential role in chitin degradation, which is a significant biological process in ecosystems where chitin, a key component of arthropod exoskeletons and fungal cell walls, is abundant. The ability to break down chitin not only contributes to nutrient cycling but also aids in the ecological balance by facilitating the recycling of organic matter. Given its single replicon characteristic, Chitinimonas koreensis R2A43-10 may exhibit efficient regulatory mechanisms for gene expression and replication, potentially enhancing its survival in diverse habitats. This efficiency could allow it to thrive in environments rich in chitinous substrates, making it a valuable player in the decomposition processes within those ecosystems. Overall, Chitinimonas koreensis R2A43-10 presents an interesting case for further study, particularly regarding its ecological roles in nutrient cycling and its potential applications in biotechnology for waste management and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChitinibacteraceae
GenusChitinimonas
SpeciesChitinimonas koreensis
StrainR2A43-10, R2A 43-10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinimonas koreensis R2A43-10, R2A 43-10, Complete Genome

Gene Summary

Adenine Count

886574 bp

Thymine Count

874709 bp

Guanine Count

1942811 bp

Cytosine Count

1944602 bp

Genome Length

5648696 bp

Protein-coding Genes

4692 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorH9L41_15185A5F9G0Positive3660738 - 366344998488.3
sigma-54-dependent fis family transcriptional regulatorH9L41_15190Q9HU19Negative3663614 - 366492147751.0
sensor histidine kinaseH9L41_15195P10047Negative3664944 - 366678567138.9
d-glycero-beta-d-manno-heptose-7-phosphate kinaseH9L41_15200Q7WGU8Negative3666844 - 366778233172.6
udp-glucose/gdp-mannose dehydrogenase family proteinH9L41_15205O86422Negative3667875 - 366918847149.9
orotidine-5'-phosphate decarboxylaseH9L41_15210A1JM26Negative3669210 - 366991424527.0
lipopolysaccharide assembly protein lapbH9L41_15215P0AB60Negative3669997 - 367116044376.8
duf1049 domain-containing proteinH9L41_15220Not AvailableNegative3671191 - 367150511785.8
integration host factor subunit betaH9L41_15225C1D546Negative3671723 - 367201010603.9
30s ribosomal protein s1H9L41_15230Q9JZ44Negative3672035 - 367374162286.8

Displaying genes 3091 – 3100 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.