Polaribacter dokdonensis DSW-5

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter dokdonensis DSW-5 is a Gram-negative bacterium characterized by its rod shape. It possesses two replicons, which indicates a complex genomic organization potentially contributing to its adaptability and survival in diverse environments. The strain is cataloged under the accession numbers CP101505.1 and CP150688.1, which provide a basis for genomic investigation and comparative studies. This organism is part of the Polaribacter genus, which is known for its ecological roles in marine environments. Members of this genus are often associated with cold-water ecosystems and can play significant roles in biogeochemical cycles, particularly in the degradation of organic matter. The presence of Polaribacter dokdonensis DSW-5 in such habitats suggests it may contribute to nutrient cycling and energy flow within these ecosystems. Overall, the traits of Polaribacter dokdonensis DSW-5 highlight its potential ecological significance, particularly in marine settings where it may interact with other microbial communities and influence environmental processes. Understanding its biology and ecology could shed light on the functioning of microbial ecosystems in polar regions and their responses to changing environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter dokdonensis
StrainDSW-5

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter dokdonensis DSW-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter dokdonensis DSW-5, Complete Genome

Gene Summary

Adenine Count

1079152 bp

Thymine Count

1080464 bp

Guanine Count

466311 bp

Cytosine Count

461526 bp

Genome Length

3087453 bp

Protein-coding Genes

2736 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-O84100Positive21470 - 2329968108.5
hypothetical protein-P81535Positive23422 - 2475349152.1
hypothetical protein-Not AvailableNegative24756 - 2553230452.5
hypothetical protein-Q68BJ6Positive25682 - 2707350260.0
hypothetical protein-Not AvailablePositive27066 - 2790832153.8
hypothetical protein-O32164Positive27921 - 2938755215.8
hypothetical protein-P44567Negative29365 - 3028536646.3
hypothetical protein-Not AvailableNegative30316 - 3124236892.2
hypothetical protein-P53259Positive31327 - 3198324144.4
Trna-glyNot AvailableNot AvailablePositive32020 - 32095Not Available

Displaying genes 21 – 30 of 5552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.