Mycobacterium phocaicum N4

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium phocaicum N4 is a rod-shaped bacterium primarily found in intertidal sediments. This organism is notable for possessing true flagella, which may contribute to its motility in the sediment environment. Mycobacterium phocaicum N4 has a single replicon, reflecting a streamlined genomic structure, which could be advantageous for its adaptation to specific ecological niches. The habitat of intertidal sediments suggests that Mycobacterium phocaicum N4 may play a role in the biogeochemical cycling of nutrients in these dynamic environments. The presence of true flagella indicates potential motility, enabling the bacterium to navigate through sediment layers, which could facilitate interactions with other microorganisms and organic matter. Such interactions may be critical for nutrient exchange and the overall health of sediment ecosystems. The genomic information for Mycobacterium phocaicum N4 is cataloged under accession number AP022616.1, providing a resource for further research into its genetic and metabolic capabilities. Understanding this bacterium's ecological role could contribute to insights into the microbial diversity and functionality within intertidal zones, highlighting its potential importance in marine ecosystem processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium phocaicum
StrainN4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintertidal sediments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium phocaicum N4, Complete Genome

Gene Summary

Adenine Count

966858 bp

Thymine Count

961547 bp

Guanine Count

1958844 bp

Cytosine Count

1965948 bp

Genome Length

5853197 bp

Protein-coding Genes

5691 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfurtransferaseMPHO_43100P9WHF4Positive4483237 - 448404027798.5
putative abc-transporter transmembrane proteinMPHO_43110Q9KD29Negative4484027 - 448485727865.0
putative abc transporter atp-binding proteinMPHO_43120Q5Z0P5Negative4484850 - 448564728425.3
hypothetical proteinMPHO_43130Q9KFG3Negative4485657 - 448656530834.7
laci family transcriptional regulatorMPHO_43140Q8NMF0Positive4486663 - 448776338766.4
trehalose 6-phosphate phosphataseMPHO_43150P9WN14Negative4487760 - 448850325210.6
hth-type transcriptional repressor kstrMPHO_43160A0R528Negative4488507 - 448917224390.2
acyl-coa dehydrogenaseMPHO_43170P96855Positive4489368 - 449147673068.2
putative transcriptional regulator, arac family proteinMPHO_43180A0A0H2ZIC3Negative4491473 - 449233032020.3
hypothetical proteinMPHO_43190Q79FL8Positive4492539 - 449388845759.6

Displaying genes 4371 – 4380 of 5758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.