Mycobacterium phocaicum N4

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium phocaicum N4 is a rod-shaped bacterium primarily found in intertidal sediments. This organism is notable for possessing true flagella, which may contribute to its motility in the sediment environment. Mycobacterium phocaicum N4 has a single replicon, reflecting a streamlined genomic structure, which could be advantageous for its adaptation to specific ecological niches. The habitat of intertidal sediments suggests that Mycobacterium phocaicum N4 may play a role in the biogeochemical cycling of nutrients in these dynamic environments. The presence of true flagella indicates potential motility, enabling the bacterium to navigate through sediment layers, which could facilitate interactions with other microorganisms and organic matter. Such interactions may be critical for nutrient exchange and the overall health of sediment ecosystems. The genomic information for Mycobacterium phocaicum N4 is cataloged under accession number AP022616.1, providing a resource for further research into its genetic and metabolic capabilities. Understanding this bacterium's ecological role could contribute to insights into the microbial diversity and functionality within intertidal zones, highlighting its potential importance in marine ecosystem processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium phocaicum
StrainN4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintertidal sediments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium phocaicum N4, Complete Genome

Gene Summary

Adenine Count

966858 bp

Thymine Count

961547 bp

Guanine Count

1958844 bp

Cytosine Count

1965948 bp

Genome Length

5853197 bp

Protein-coding Genes

5691 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantothenate synthetaseMPHO_42600A0R580Positive4432829 - 443379734338.1
aspartate 1-decarboxylaseMPHO_42610P65661Positive4433797 - 443420414583.3
type iii pantothenate kinaseMPHO_42620A0R579Positive4434210 - 443501328674.4
amino acid deaminaseMPHO_42630O82872Negative4435063 - 443632245640.5
lysine--trna ligaseMPHO_42640A4T5M9Positive4436347 - 443784956026.6
lsr2 family proteinMPHO_42650P65649Positive4437960 - 443830712568.7
atp-dependent clp protease atp-binding subunit clpc1MPHO_42660P9WPC8Positive4438629 - 444108890441.1
cobalt transporterMPHO_42670Not AvailablePositive4441295 - 44415107676.55
hypothetical proteinMPHO_42680Not AvailablePositive4441525 - 444243331990.3
upf0145 proteinMPHO_42690A0LWS1Positive4442491 - 444288613835.5

Displaying genes 4321 – 4330 of 5758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.