Mycobacterium phocaicum N4

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium phocaicum N4 is a rod-shaped bacterium primarily found in intertidal sediments. This organism is notable for possessing true flagella, which may contribute to its motility in the sediment environment. Mycobacterium phocaicum N4 has a single replicon, reflecting a streamlined genomic structure, which could be advantageous for its adaptation to specific ecological niches. The habitat of intertidal sediments suggests that Mycobacterium phocaicum N4 may play a role in the biogeochemical cycling of nutrients in these dynamic environments. The presence of true flagella indicates potential motility, enabling the bacterium to navigate through sediment layers, which could facilitate interactions with other microorganisms and organic matter. Such interactions may be critical for nutrient exchange and the overall health of sediment ecosystems. The genomic information for Mycobacterium phocaicum N4 is cataloged under accession number AP022616.1, providing a resource for further research into its genetic and metabolic capabilities. Understanding this bacterium's ecological role could contribute to insights into the microbial diversity and functionality within intertidal zones, highlighting its potential importance in marine ecosystem processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium phocaicum
StrainN4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintertidal sediments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium phocaicum N4, Complete Genome

Gene Summary

Adenine Count

966858 bp

Thymine Count

961547 bp

Guanine Count

1958844 bp

Cytosine Count

1965948 bp

Genome Length

5853197 bp

Protein-coding Genes

5691 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transcriptional regulator, marr family proteinMPHO_30620Q796S4Negative3165755 - 316629119557.5
putative zinc-binding alcohol dehydrogenaseMPHO_30630A7XRY6Positive3166366 - 316734034149.8
hypothetical proteinMPHO_30640P9WLG4Positive3167452 - 316836334449.5
phosphate import atp-binding protein pstbMPHO_30650A0R4C0Negative3168468 - 316924428052.8
phosphate transport system permease protein pstaMPHO_30660P9WG10Negative3169261 - 317018732805.5
phosphate transport system permease proteinMPHO_30670P0A631Negative3170184 - 317121536168.6
phosphate-binding protein pstsMPHO_30680Q9KK89Negative3171291 - 317240037501.9
mycothiol acetyltransferaseMPHO_30690A3Q695Negative3172550 - 317344031518.4
transcriptional regulatorMPHO_30700Q05943Negative3173437 - 317421327580.8
hypothetical proteinMPHO_30710Not AvailablePositive3174422 - 317521927968.7

Displaying genes 3111 – 3120 of 5758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.