Mycobacterium phocaicum N4

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium phocaicum N4 is a rod-shaped bacterium primarily found in intertidal sediments. This organism is notable for possessing true flagella, which may contribute to its motility in the sediment environment. Mycobacterium phocaicum N4 has a single replicon, reflecting a streamlined genomic structure, which could be advantageous for its adaptation to specific ecological niches. The habitat of intertidal sediments suggests that Mycobacterium phocaicum N4 may play a role in the biogeochemical cycling of nutrients in these dynamic environments. The presence of true flagella indicates potential motility, enabling the bacterium to navigate through sediment layers, which could facilitate interactions with other microorganisms and organic matter. Such interactions may be critical for nutrient exchange and the overall health of sediment ecosystems. The genomic information for Mycobacterium phocaicum N4 is cataloged under accession number AP022616.1, providing a resource for further research into its genetic and metabolic capabilities. Understanding this bacterium's ecological role could contribute to insights into the microbial diversity and functionality within intertidal zones, highlighting its potential importance in marine ecosystem processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium phocaicum
StrainN4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintertidal sediments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium phocaicum N4, Complete Genome

Gene Summary

Adenine Count

966858 bp

Thymine Count

961547 bp

Guanine Count

1958844 bp

Cytosine Count

1965948 bp

Genome Length

5853197 bp

Protein-coding Genes

5691 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fumarate reductase/succinate dehydrogenase flavoprotein-like frdaMPHO_10240Q9X8N8Negative1048151 - 105083896817.5
putative nitrate abc transporter, atp-binding proteinMPHO_10250Q2YJB5Negative1050835 - 105157826747.4
putative nitrate abc transporter, permease proteinMPHO_10260Q576D9Negative1051575 - 105242930513.6
putative nitrate abc transporter, periplasmic proteinMPHO_10270P75853Negative1052426 - 105384149716.8
putative ferredoxinMPHO_10280Q57652Negative1053850 - 10540808250.97
putative gntr-family transcriptional regulatorMPHO_10290Q82IW0Negative1054077 - 105481726871.2
molybdopterin-binding oxidoreductaseMPHO_10300P37600Negative1055189 - 105743879765.6
hypothetical proteinMPHO_10310Not AvailableNegative1057500 - 105803920584.2
n utilization substance protein bMPHO_10320A4TBX3Negative1058042 - 105850916630.7
elongation factor pMPHO_10330A4TBX4Negative1058502 - 105906520417.3

Displaying genes 1031 – 1040 of 5758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.