Pseudoalteromonas tunicata D2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tunicata D2 is a rod-shaped bacterium notable for its association with marine hosts, specifically bryozoa and tunicates. This species is characterized by having four replicons, which may contribute to its genetic diversity and adaptability in marine environments. Genomic data for P. tunicata D2 can be found under several accessions, namely CP031961.1, CP031962.1, CP011032.1, and CP011033.1. These accessions indicate the availability of its genetic information, which can be useful for further studies on its biology and interactions with host organisms. The ecological significance of P. tunicata D2 lies in its potential role in marine ecosystems, particularly concerning its relationships with bryozoa and tunicates. These hosts are vital components of marine habitats, providing structure and habitat for various marine organisms. By interacting with such hosts, P. tunicata D2 might influence nutrient cycling and the health of these ecosystems. Understanding the dynamics between P. tunicata D2 and its marine hosts could shed light on the broader ecological roles of bacteria in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tunicata
StrainD2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bryozoa, Tunicata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tunicata D2, Complete Genome

Gene Summary

Adenine Count

1197690 bp

Thymine Count

1194965 bp

Guanine Count

793178 bp

Cytosine Count

799305 bp

Genome Length

3985138 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinPTUN_a3905P64605Negative3618047 - 361855918283.1
phospholipid/cholesterol/gamma-hch transport system permease proteinPTUN_a3906P45030Negative3618574 - 361935327918.1
phospholipid/cholesterol/gamma-hch transport system atp-binding proteinPTUN_a3907P63388Negative3619350 - 362020130845.0
cation:h+ antiporterPTUN_a3908Q0ZAI3Positive3620331 - 362129933847.1
arabinose-5-phosphate isomerasePTUN_a3909Q8D1Q8Positive3621312 - 362228334297.0
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)PTUN_a3910Q8Z3G5Positive3622283 - 362283419909.1
lipopolysaccharide export system protein lptcPTUN_a3911P45075Positive3622831 - 362338521021.1
lipopolysaccharide export system protein lptaPTUN_a3912P45074Positive3623375 - 362387518374.9
lipopolysaccharide export system atp-binding proteinPTUN_a3913P45073Positive3623872 - 362459726721.8
rna polymerase sigma-54 factorPTUN_a3916Q9S0L2Positive3624659 - 362614655955.0

Displaying genes 7791 – 7800 of 8921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.