Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas tunicata |
| Strain | D2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bryozoa, Tunicata |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas tunicata D2, Complete Genome
Gene Summary
Adenine Count
1197690 bp
Thymine Count
1194965 bp
Guanine Count
793178 bp
Cytosine Count
799305 bp
Genome Length
3985138 bp
Protein-coding Genes
3434 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgl domain-containing protein | D1819_20960 | Q3ICF9 | Positive | 766373 - 766654 | 10603.8 |
| lytic murein transglycosylase | D1819_20965 | P41052 | Positive | 766651 - 767679 | 39119.6 |
| ycgn family cysteine cluster protein | D1819_20970 | B9JU16 | Positive | 767762 - 768259 | 18963.0 |
| trmh family rna methyltransferase | D1819_20975 | Q6FF50 | Positive | 768271 - 768786 | 18665.4 |
| carbohydrate kinase | D1819_20980 | O82616 | Negative | 768847 - 769785 | 34092.9 |
| age family epimerase/isomerase | D1819_20985 | F2JVT6 | Negative | 769782 - 770918 | 44422.1 |
| glucose/galactose mfs transporter | D1819_20990 | Q2YIJ8 | Positive | 771103 - 772365 | 45296.2 |
| glycoside hydrolase family 92 protein | D1819_20995 | O86365 | Positive | 772631 - 774961 | 87680.2 |
| secretion protein | D1819_21000 | Not Available | Positive | 774965 - 775720 | 28359.9 |
| hypothetical protein | D1819_21005 | Not Available | Positive | 775927 - 776652 | 27133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
