Pseudoalteromonas tunicata D2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tunicata D2 is a rod-shaped bacterium notable for its association with marine hosts, specifically bryozoa and tunicates. This species is characterized by having four replicons, which may contribute to its genetic diversity and adaptability in marine environments. Genomic data for P. tunicata D2 can be found under several accessions, namely CP031961.1, CP031962.1, CP011032.1, and CP011033.1. These accessions indicate the availability of its genetic information, which can be useful for further studies on its biology and interactions with host organisms. The ecological significance of P. tunicata D2 lies in its potential role in marine ecosystems, particularly concerning its relationships with bryozoa and tunicates. These hosts are vital components of marine habitats, providing structure and habitat for various marine organisms. By interacting with such hosts, P. tunicata D2 might influence nutrient cycling and the health of these ecosystems. Understanding the dynamics between P. tunicata D2 and its marine hosts could shed light on the broader ecological roles of bacteria in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tunicata
StrainD2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bryozoa, Tunicata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tunicata D2, Complete Genome

Gene Summary

Adenine Count

1197690 bp

Thymine Count

1194965 bp

Guanine Count

793178 bp

Cytosine Count

799305 bp

Genome Length

3985138 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ggdef domain-containing proteinD1819_11975Q9KVL2Positive2650796 - 265268571572.8
sam-dependent methyltransferaseD1819_11980Q5KW28Negative2652738 - 265340325193.8
abc transporter permeaseD1819_11985P0AFN8Negative2653403 - 265417028244.6
abc transporter atp-binding proteinD1819_11990P36879Negative2654170 - 265510534283.7
ubix family flavin prenyltransferaseD1819_11995Q9KP38Negative2655105 - 265572522253.1
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseD1819_12000P37773Negative2655764 - 265711349238.3
duf5117 domain-containing proteinD1819_12005Not AvailableNegative2657196 - 265959889013.1
class 1 fructose-bisphosphataseD1819_12010Q3IFQ5Positive2659871 - 266083935257.3
vcbs repeat-containing proteinD1819_12015Not AvailableNegative2660945 - 266246555672.6
hypothetical proteinD1819_12020Q5VUE5Positive2662740 - 266303911053.2

Displaying genes 2431 – 2440 of 8921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.