Pseudoalteromonas tunicata D2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tunicata D2 is a rod-shaped bacterium notable for its association with marine hosts, specifically bryozoa and tunicates. This species is characterized by having four replicons, which may contribute to its genetic diversity and adaptability in marine environments. Genomic data for P. tunicata D2 can be found under several accessions, namely CP031961.1, CP031962.1, CP011032.1, and CP011033.1. These accessions indicate the availability of its genetic information, which can be useful for further studies on its biology and interactions with host organisms. The ecological significance of P. tunicata D2 lies in its potential role in marine ecosystems, particularly concerning its relationships with bryozoa and tunicates. These hosts are vital components of marine habitats, providing structure and habitat for various marine organisms. By interacting with such hosts, P. tunicata D2 might influence nutrient cycling and the health of these ecosystems. Understanding the dynamics between P. tunicata D2 and its marine hosts could shed light on the broader ecological roles of bacteria in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tunicata
StrainD2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bryozoa, Tunicata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tunicata D2, Complete Genome

Gene Summary

Adenine Count

1197690 bp

Thymine Count

1194965 bp

Guanine Count

793178 bp

Cytosine Count

799305 bp

Genome Length

3985138 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoglycoside phosphotransferase family proteinD1819_11775E8MF12Negative2598926 - 259999340325.0
hypothetical proteinD1819_11780Not AvailableNegative2600017 - 260090732446.3
nad-dependent succinate-semialdehyde dehydrogenaseD1819_11785B9F3B6Negative2601021 - 260248752591.4
isc system 2fe-2s type ferredoxinD1819_11790Q51383Negative2602657 - 260299512303.6
fe-s protein assembly chaperone hscaD1819_11795Q3IFG5Negative2602997 - 260485966467.6
co-chaperone hscbD1819_11800A7MU46Negative2604881 - 260540820162.1
iron-sulfur cluster assembly protein iscaD1819_11805C6DBI9Negative2605496 - 260581911504.6
fe-s cluster assembly scaffold iscuD1819_11810P0ACD6Negative2605829 - 260621213417.0
iscs subfamily cysteine desulfuraseD1819_11815Q3IFI3Negative2606279 - 260749345014.9
fe-s cluster assembly transcriptional regulator iscrD1819_11820C5BEU6Negative2607517 - 260800517701.3

Displaying genes 2391 – 2400 of 8921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.