Pseudoalteromonas tunicata D2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tunicata D2 is a rod-shaped bacterium notable for its association with marine hosts, specifically bryozoa and tunicates. This species is characterized by having four replicons, which may contribute to its genetic diversity and adaptability in marine environments. Genomic data for P. tunicata D2 can be found under several accessions, namely CP031961.1, CP031962.1, CP011032.1, and CP011033.1. These accessions indicate the availability of its genetic information, which can be useful for further studies on its biology and interactions with host organisms. The ecological significance of P. tunicata D2 lies in its potential role in marine ecosystems, particularly concerning its relationships with bryozoa and tunicates. These hosts are vital components of marine habitats, providing structure and habitat for various marine organisms. By interacting with such hosts, P. tunicata D2 might influence nutrient cycling and the health of these ecosystems. Understanding the dynamics between P. tunicata D2 and its marine hosts could shed light on the broader ecological roles of bacteria in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tunicata
StrainD2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bryozoa, Tunicata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tunicata D2, Complete Genome

Gene Summary

Adenine Count

1197690 bp

Thymine Count

1194965 bp

Guanine Count

793178 bp

Cytosine Count

799305 bp

Genome Length

3985138 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf885 domain-containing proteinD1819_00980Not AvailableNegative222285 - 22412068833.3
radical sam family heme chaperone hemwD1819_00985P52062Negative224212 - 22534842567.8
xtp/ditp diphosphataseD1819_00990Q83JS0Negative225345 - 22594421647.0
pilz domain-containing proteinD1819_00995Q9HVI1Negative226103 - 22646513702.7
energy-dependent translational throttle protein ettaD1819_01000P45127Negative226684 - 22834862596.5
diguanylate cyclaseD1819_01005A0A0H3AFM6Positive228542 - 22982248459.8
serine hydroxymethyltransferaseD1819_01010Q3II23Positive230075 - 23133145271.8
transcriptional regulator nrdrD1819_01015Q3II24Positive231498 - 23194717268.8
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdD1819_01020P25539Positive231952 - 23307340204.0
riboflavin synthaseD1819_01025P51961Positive233077 - 23373323284.3

Displaying genes 231 – 240 of 8921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.