Pseudoalteromonas tunicata D2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas tunicata D2 is a rod-shaped bacterium notable for its association with marine hosts, specifically bryozoa and tunicates. This species is characterized by having four replicons, which may contribute to its genetic diversity and adaptability in marine environments. Genomic data for P. tunicata D2 can be found under several accessions, namely CP031961.1, CP031962.1, CP011032.1, and CP011033.1. These accessions indicate the availability of its genetic information, which can be useful for further studies on its biology and interactions with host organisms. The ecological significance of P. tunicata D2 lies in its potential role in marine ecosystems, particularly concerning its relationships with bryozoa and tunicates. These hosts are vital components of marine habitats, providing structure and habitat for various marine organisms. By interacting with such hosts, P. tunicata D2 might influence nutrient cycling and the health of these ecosystems. Understanding the dynamics between P. tunicata D2 and its marine hosts could shed light on the broader ecological roles of bacteria in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas tunicata
StrainD2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bryozoa, Tunicata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas tunicata D2, Complete Genome

Gene Summary

Adenine Count

1197690 bp

Thymine Count

1194965 bp

Guanine Count

793178 bp

Cytosine Count

799305 bp

Genome Length

3985138 bp

Protein-coding Genes

3434 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotidine-5'-phosphate decarboxylaseD1819_05725Q3IGA7Negative1280459 - 128116025258.8
lipopolysaccharide assembly protein lapbD1819_05730P0AB60Negative1281171 - 128230743452.7
lapa family proteinD1819_05735P44129Negative1282311 - 12825719751.46
integration host factor subunit betaD1819_05740Q3IL99Negative1282587 - 128287710904.9
30s ribosomal protein s1D1819_05745P37985Negative1282937 - 128460461090.6
(d)cmp kinaseD1819_05750A0KJ92Negative1284704 - 128538424782.8
3-phosphoshikimate 1-carboxyvinyltransferaseD1819_05755Q3ILA2Negative1285479 - 128675645924.4
3-phosphoserine/phosphohydroxythreonine transaminaseD1819_05760Q3ILA3Negative1286756 - 128783839597.4
dna gyrase subunit aD1819_05765P37411Negative1287997 - 1290696100105.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigD1819_05770Q3ILA5Positive1290851 - 129155826113.3

Displaying genes 1181 – 1190 of 8921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.