Thioclava litoralis FTW29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava litoralis FTW29 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic architecture, consisting of seven replicons. This feature indicates a complex genetic makeup, which might contribute to its adaptability and survival in various environments. The organism is cataloged under several accessions, specifically CP135443.1, CP135444.1, CP135445.1, CP135446.1, CP135447.1, CP135448.1, and CP135449.1. These accessions represent the genomic sequences that provide insights into the genetic diversity and potential functional capabilities of T. litoralis FTW29. The presence of multiple replicons suggests a sophisticated system for gene regulation and replication, which could facilitate rapid responses to environmental changes. From a biological and ecological perspective, the properties of T. litoralis FTW29 may enable it to thrive in diverse ecological niches. The rod shape and Gram-negative status could influence its interactions with other microorganisms, potentially affecting community dynamics in its habitat. Furthermore, the genomic complexity may allow for metabolic versatility, positioning T. litoralis FTW29 as a significant player in nutrient cycling or bioremediation processes in its environment. Understanding the traits of Thioclava litoralis FTW29 can provide valuable insights into its ecological roles and potential applications in biotechnology and environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava litoralis
StrainFTW29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava litoralis FTW29, Complete Genome

Gene Summary

Adenine Count

545860 bp

Thymine Count

543355 bp

Guanine Count

850907 bp

Cytosine Count

852721 bp

Genome Length

2792843 bp

Protein-coding Genes

2602 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseRPE78_10070Q5BKM6Positive2042816 - 204384136324.6
peptidoglycan editing factor pgefRPE78_10075Q9RT03Positive2043914 - 204468727199.5
m3 family oligoendopeptidaseRPE78_10080Q9CEV7Negative2044750 - 204657368041.8
circularly permuted type 2 atp-grasp proteinRPE78_10085Q55587Positive2046983 - 204839552506.3
alpha-e domain-containing proteinRPE78_10090P9WL96Positive2048463 - 204941936404.3
transglutaminase family proteinRPE78_10095Q49757Positive2049416 - 205022829573.8
proteasome-type proteaseRPE78_10100Not AvailablePositive2050272 - 205099726315.0
alpha/beta hydrolaseRPE78_10105P59588Negative2051001 - 205193934581.1
scp2 sterol-binding domain-containing proteinRPE78_10110Q6PAY8Negative2051936 - 205223210244.5
tetratricopeptide repeat proteinRPE78_10115Q2K4E6Positive2052366 - 205289318702.6

Displaying genes 2071 – 2080 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.