Thioclava litoralis FTW29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava litoralis FTW29 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic architecture, consisting of seven replicons. This feature indicates a complex genetic makeup, which might contribute to its adaptability and survival in various environments. The organism is cataloged under several accessions, specifically CP135443.1, CP135444.1, CP135445.1, CP135446.1, CP135447.1, CP135448.1, and CP135449.1. These accessions represent the genomic sequences that provide insights into the genetic diversity and potential functional capabilities of T. litoralis FTW29. The presence of multiple replicons suggests a sophisticated system for gene regulation and replication, which could facilitate rapid responses to environmental changes. From a biological and ecological perspective, the properties of T. litoralis FTW29 may enable it to thrive in diverse ecological niches. The rod shape and Gram-negative status could influence its interactions with other microorganisms, potentially affecting community dynamics in its habitat. Furthermore, the genomic complexity may allow for metabolic versatility, positioning T. litoralis FTW29 as a significant player in nutrient cycling or bioremediation processes in its environment. Understanding the traits of Thioclava litoralis FTW29 can provide valuable insights into its ecological roles and potential applications in biotechnology and environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava litoralis
StrainFTW29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava litoralis FTW29, Complete Genome

Gene Summary

Adenine Count

545860 bp

Thymine Count

543355 bp

Guanine Count

850907 bp

Cytosine Count

852721 bp

Genome Length

2792843 bp

Protein-coding Genes

2602 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRPE78_10020Not AvailableNegative2035046 - 203575023447.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataRPE78_10025Q1GFB5Negative2035763 - 203724152279.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcRPE78_10030A4WUQ3Negative2037238 - 203752510622.8
metal-dependent hydrolaseRPE78_10035A1AZJ2Positive2037672 - 203836424709.6
rna polymerase sigma factor rpohRPE78_10040P0CAW9Negative2038428 - 203932434217.7
rlua family pseudouridine synthaseRPE78_10045P50513Negative2039526 - 204055736952.3
duf6476 family proteinRPE78_10050Not AvailablePositive2040556 - 204086411032.6
nudix hydrolaseRPE78_10055Q58549Positive2040861 - 204130415454.5
accessory factor ubik family proteinRPE78_10060Not AvailableNegative2041380 - 20416229027.8
prolipoprotein diacylglyceryl transferaseRPE78_10065A4WP56Positive2041860 - 204276532648.0

Displaying genes 2061 – 2070 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.