Thioclava litoralis FTW29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava litoralis FTW29 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic architecture, consisting of seven replicons. This feature indicates a complex genetic makeup, which might contribute to its adaptability and survival in various environments. The organism is cataloged under several accessions, specifically CP135443.1, CP135444.1, CP135445.1, CP135446.1, CP135447.1, CP135448.1, and CP135449.1. These accessions represent the genomic sequences that provide insights into the genetic diversity and potential functional capabilities of T. litoralis FTW29. The presence of multiple replicons suggests a sophisticated system for gene regulation and replication, which could facilitate rapid responses to environmental changes. From a biological and ecological perspective, the properties of T. litoralis FTW29 may enable it to thrive in diverse ecological niches. The rod shape and Gram-negative status could influence its interactions with other microorganisms, potentially affecting community dynamics in its habitat. Furthermore, the genomic complexity may allow for metabolic versatility, positioning T. litoralis FTW29 as a significant player in nutrient cycling or bioremediation processes in its environment. Understanding the traits of Thioclava litoralis FTW29 can provide valuable insights into its ecological roles and potential applications in biotechnology and environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava litoralis
StrainFTW29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava litoralis FTW29, Complete Genome

Gene Summary

Adenine Count

545860 bp

Thymine Count

543355 bp

Guanine Count

850907 bp

Cytosine Count

852721 bp

Genome Length

2792843 bp

Protein-coding Genes

2602 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nickel-dependent hydrogenase large subunitRPE78_09235P21852Positive1894566 - 189599951446.2
carbamoyltransferase hypfRPE78_09240Q02987Positive1896076 - 189834079529.0
hydrogenase small subunitRPE78_09245P15283Positive1898551 - 189962739153.9
nickel-dependent hydrogenase large subunitRPE78_09250P15284Positive1899630 - 190142666492.0
hypothetical proteinRPE78_09255Not AvailablePositive1901440 - 19016346602.2
ni/fe-hydrogenase, b-type cytochrome subunitRPE78_09260P16145Positive1901638 - 190241729683.5
fad-dependent oxidoreductaseRPE78_09265Q3TY86Positive1902553 - 190405553522.4
hyad/hybd family hydrogenase maturation endopeptidaseRPE78_09270Q03004Positive1904306 - 190494723346.9
hypc/hybg/hupf family hydrogenase formation chaperoneRPE78_09275Q03005Positive1904947 - 190526710895.2
hydrogenase accessory proteinRPE78_09280Q03006Positive1905278 - 190569415553.5

Displaying genes 1951 – 1960 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.