Thioclava litoralis FTW29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava litoralis FTW29 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic architecture, consisting of seven replicons. This feature indicates a complex genetic makeup, which might contribute to its adaptability and survival in various environments. The organism is cataloged under several accessions, specifically CP135443.1, CP135444.1, CP135445.1, CP135446.1, CP135447.1, CP135448.1, and CP135449.1. These accessions represent the genomic sequences that provide insights into the genetic diversity and potential functional capabilities of T. litoralis FTW29. The presence of multiple replicons suggests a sophisticated system for gene regulation and replication, which could facilitate rapid responses to environmental changes. From a biological and ecological perspective, the properties of T. litoralis FTW29 may enable it to thrive in diverse ecological niches. The rod shape and Gram-negative status could influence its interactions with other microorganisms, potentially affecting community dynamics in its habitat. Furthermore, the genomic complexity may allow for metabolic versatility, positioning T. litoralis FTW29 as a significant player in nutrient cycling or bioremediation processes in its environment. Understanding the traits of Thioclava litoralis FTW29 can provide valuable insights into its ecological roles and potential applications in biotechnology and environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava litoralis
StrainFTW29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava litoralis FTW29, Complete Genome

Gene Summary

Adenine Count

545860 bp

Thymine Count

543355 bp

Guanine Count

850907 bp

Cytosine Count

852721 bp

Genome Length

2792843 bp

Protein-coding Genes

2602 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar biosynthetic protein fliqRPE78_07715P35535Positive1584912 - 15851789594.15
flagellar hook-basal body complex proteinRPE78_07720Q06171Positive1585182 - 158589525374.8
flagellar basal-body rod protein flggRPE78_07725Q06172Positive1585907 - 158669227332.3
flagellar basal body p-ring formation chaperone flgaRPE78_07730Q52947Positive1586692 - 158712315128.2
flagellar basal body l-ring protein flghRPE78_07735Q5LWX7Positive1587129 - 158785426299.3
flagellar basal body-associated flil family proteinRPE78_07740Not AvailablePositive1587862 - 158838318432.1
ribonuclease dRPE78_07745A9H9B7Positive1588588 - 158920222721.5
hypothetical proteinRPE78_07750Not AvailablePositive1589221 - 158982321174.7
lipopolysaccharide transport periplasmic protein lptaRPE78_07755P25893Positive1589835 - 159032016791.0
lps export abc transporter atp-binding proteinRPE78_07760P33982Positive1590320 - 159106927805.5

Displaying genes 1661 – 1670 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.