Thioclava litoralis FTW29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava litoralis FTW29 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic architecture, consisting of seven replicons. This feature indicates a complex genetic makeup, which might contribute to its adaptability and survival in various environments. The organism is cataloged under several accessions, specifically CP135443.1, CP135444.1, CP135445.1, CP135446.1, CP135447.1, CP135448.1, and CP135449.1. These accessions represent the genomic sequences that provide insights into the genetic diversity and potential functional capabilities of T. litoralis FTW29. The presence of multiple replicons suggests a sophisticated system for gene regulation and replication, which could facilitate rapid responses to environmental changes. From a biological and ecological perspective, the properties of T. litoralis FTW29 may enable it to thrive in diverse ecological niches. The rod shape and Gram-negative status could influence its interactions with other microorganisms, potentially affecting community dynamics in its habitat. Furthermore, the genomic complexity may allow for metabolic versatility, positioning T. litoralis FTW29 as a significant player in nutrient cycling or bioremediation processes in its environment. Understanding the traits of Thioclava litoralis FTW29 can provide valuable insights into its ecological roles and potential applications in biotechnology and environmental sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava litoralis
StrainFTW29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava litoralis FTW29, Complete Genome

Gene Summary

Adenine Count

545860 bp

Thymine Count

543355 bp

Guanine Count

850907 bp

Cytosine Count

852721 bp

Genome Length

2792843 bp

Protein-coding Genes

2602 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan dd-metalloendopeptidase family proteinRPE78_06115Q9JZ20Negative1242382 - 124353640886.2
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseRPE78_06120Q3IZB8Negative1243536 - 124506854654.8
hypothetical proteinRPE78_06125Not AvailableNegative1245157 - 124588226697.8
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhRPE78_06130Q1GDM9Negative1245891 - 124635817069.8
ribosome silencing factorRPE78_06135Q5NLX3Negative1246375 - 124674013459.1
duf6525 family proteinRPE78_06140Not AvailableNegative1246902 - 12471539487.5
methyl-accepting chemotaxis proteinRPE78_06145P55652Negative1247260 - 124934775472.4
saccharopine dehydrogenase family proteinRPE78_06150P0DPE4Negative1249536 - 125078045243.6
carboxynorspermidine decarboxylaseRPE78_06155Q5QCP2Negative1250830 - 125192740692.3
hypothetical proteinRPE78_06160Not AvailableNegative1252015 - 125271925522.6

Displaying genes 1341 – 1350 of 3743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.