Paracoccus sediminicola SCSIO 76264

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus sediminicola SCSIO 76264 is a notable bacterium characterized by the presence of flagella, which facilitate its motility. This organism possesses a complex genomic structure, comprising seven distinct replicons, indicating a potentially intricate regulatory and functional genomic architecture. The available gene accessions for Paracoccus sediminicola SCSIO 76264 include CP115768.1, CP115769.1, CP115770.1, CP115771.1, CP115772.1, CP115773.1, and CP115774.1. These accessions provide valuable information for further genomic studies and analyses, enabling researchers to explore the genetic basis of its traits and behaviors. The presence of flagella suggests an adaptation to its environment, allowing Paracoccus sediminicola SCSIO 76264 to navigate through sedimentary habitats. This motility may play a significant role in its ecological interactions, such as nutrient acquisition, biofilm formation, or colonization of substrates. Understanding these interactions can provide insights into the ecological dynamics within sedimentary environments, where such bacteria may contribute to biogeochemical cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus sediminicola
StrainSCSIO 76264

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus sediminicola SCSIO 76264, Complete Genome

Gene Summary

Adenine Count

568630 bp

Thymine Count

571069 bp

Guanine Count

1019202 bp

Cytosine Count

1016331 bp

Genome Length

3175232 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding proteinPAF18_04135Q52663Positive824801 - 82582636363.4
pyridoxamine 5'-phosphate oxidase family proteinPAF18_04140Not AvailablePositive825963 - 82643617543.6
ligase-associated dna damage response exonucleasePAF18_04145B1ZZL9Positive826437 - 82744436689.8
cisplatin damage response atp-dependent dna ligasePAF18_04150Q1II25Positive827444 - 82902458716.4
ligase-associated dna damage response dexh box helicasePAF18_04155O27830Positive829021 - 83141486640.3
ligase-associated dna damage response endonuclease pdemPAF18_04160Not AvailablePositive831411 - 83204622589.4
marr family winged helix-turn-helix transcriptional regulatorPAF18_04165O33817Negative832050 - 83256519309.1
abc transporter substrate-binding proteinPAF18_04170P23847Positive832961 - 83454758611.5
abc transporter permease subunitPAF18_04175A0A0H2ZGW7Positive834625 - 83563236528.9
abc transporter permease subunitPAF18_04180A0A0H2ZFV0Positive835636 - 83654732747.9

Displaying genes 861 – 870 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.