Rhodothermus marinus

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rhodothermaceae

Genus

Rhodothermus

Description

Rhodothermus marinus is a thermophilic, aerobic, Gram-negative bacterium classified as a rod-shaped organism. It is characterized by a cell arrangement of singles, indicating that it typically exists as individual cells rather than in clusters or chains. R. marinus is non-motile, despite possessing flagella, which may play roles in the organism's physiology that are not fully understood. This bacterium thrives at an optimal temperature of 65°C, within a broader temperature range that classifies it as thermophilic. Such an adaptation allows R. marinus to inhabit extreme environments, likely contributing to its ecological role in high-temperature ecosystems. It is known to have two replicons, which may support its genetic stability and adaptability under thermophilic conditions. Rhodothermus marinus exists as a free-living organism, suggesting that it does not rely on a host for survival, which may enable it to exploit various ecological niches. The presence of multiple accessions, such as AP019796.1 and AP019797.1, indicates a body of genetic information that can be leveraged for further research. The ecological insight from R. marinus is its potential role in biogeochemical cycles within hot environments, where its metabolic processes may contribute to nutrient recycling and the stability of microbial communities. Understanding such thermophilic bacteria could provide valuable information about microbial life in extreme habitats and their applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilyRhodothermaceae
GenusRhodothermus
SpeciesRhodothermus marinus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodothermus marinus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature65
Temperature rangeThermophilic
HabitatArima Onsen; coastal hot spring; hot spring; Iceland
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodothermus marinus , Complete Genome

Gene Summary

Adenine Count

620239 bp

Thymine Count

615116 bp

Guanine Count

1099944 bp

Cytosine Count

1104806 bp

Genome Length

3440105 bp

Protein-coding Genes

2981 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-proNot AvailableNot AvailablePositive736262 - 736335Not Available
amp-binding proteinRmaAA213_06560P44446Negative736415 - 73831670919.9
dihydroorotate dehydrogenase 2RmaAA213_06570A5UX75Negative738403 - 73949740125.8
isomeraseRmaAA213_06580Q9KG32Positive739618 - 74041829563.6
peptidase s9RmaAA213_06590Not AvailableNegative740420 - 743506115289.0
penicillin-binding protein 2RmaAA213_06600E1WGF1Positive743764 - 74561168330.8
rod shape-determining protein rodaRmaAA213_06610O83514Positive745616 - 74687244816.1
arginine--trna ligaseRmaAA213_06620Q2S3W3Positive746936 - 74863064077.7
prephenate dehydrataseRmaAA213_06630Q9SSE7Positive748633 - 74949031229.6
cell division protein ftsxRmaAA213_06640Q81X30Positive749500 - 75038132207.0

Displaying genes 671 – 680 of 6059 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002231beta-D-glucosyl-(1->4)-D-mannopyranoseC12H22O11Chemical structure of beta-D-glucosyl-(1->4)-D-mannopyranoseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0002783(2R)-2-O-(alpha-D-mannosyl)-glycerateC9H15O9Chemical structure of (2R)-2-O-(alpha-D-mannosyl)-glycerateNot available
Average267.211Da
Monoisotopic267.0721556Da
BASm0017296Guanosine diphosphate mannoseC16H25N5O16P2Chemical structure of Guanosine diphosphate mannose3123-67-9
Average605.3411Da
Monoisotopic605.077152801Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039911Acinetobacter radioresistens NIPH 2130Not available138-08-9Not available

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.