Comamonas endophytica 5MLIR

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas endophytica 5MLIR is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This species is notable for its genomic structure, possessing three replicons, as indicated by its accession numbers CP106881.1, CP106882.1, and CP106883.1. These replicons suggest a complex genomic organization that may contribute to its adaptability and ecological interactions. The presence of flagella is crucial for the bacterium's movement and may facilitate its ability to colonize various environments, including plant tissues, where it can act as an endophyte. Endophytes are organisms that live within plant tissues without causing harm, and they can play significant roles in plant health, nutrient acquisition, and stress resilience. Understanding the genomic structure and motility of Comamonas endophytica 5MLIR can provide insights into its ecological role, particularly in symbiotic relationships with plants. The adaptability suggested by its three replicons may enhance its survival and functioning within diverse ecological niches. This adaptability could impact agricultural practices, particularly in fostering plant growth and health through beneficial microbial interactions. Overall, Comamonas endophytica 5MLIR exemplifies the intricate relationships between microorganisms and their plant hosts, highlighting the potential benefits of studying endophytic bacteria for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas endophytica
Strain5MLIR

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas endophytica 5MLIR, Complete Genome

Gene Summary

Adenine Count

611999 bp

Thymine Count

620995 bp

Guanine Count

1236916 bp

Cytosine Count

1240096 bp

Genome Length

3710006 bp

Protein-coding Genes

3269 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseM9799_13005A1TNR1Positive2874652 - 287653567256.2
abc transporter substrate-binding proteinM9799_13010Q3J1R2Positive2877145 - 287822739362.1
abc transporter substrate-binding proteinM9799_13015Q3J1R2Positive2878360 - 287943939655.4
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhM9799_13020Not AvailableNegative2879508 - 28796866725.1
trap transporter large permease subunitM9799_13025O07838Negative2879797 - 288157863345.8
trap transporter small permease subunitM9799_13030Not AvailableNegative2881597 - 288220222469.7
hypothetical proteinM9799_13035Not AvailableNegative2882430 - 288279213211.3
undecaprenyl-diphosphate phosphataseM9799_13040B9MFI6Positive2882927 - 288375429827.4
sdr family oxidoreductaseM9799_13045Q9BTZ2Positive2883804 - 288450824812.6
alpha/beta hydrolaseM9799_13050Q8R431Negative2884505 - 288531730018.3

Displaying genes 2601 – 2610 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.