Comamonas endophytica 5MLIR

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas endophytica 5MLIR is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This species is notable for its genomic structure, possessing three replicons, as indicated by its accession numbers CP106881.1, CP106882.1, and CP106883.1. These replicons suggest a complex genomic organization that may contribute to its adaptability and ecological interactions. The presence of flagella is crucial for the bacterium's movement and may facilitate its ability to colonize various environments, including plant tissues, where it can act as an endophyte. Endophytes are organisms that live within plant tissues without causing harm, and they can play significant roles in plant health, nutrient acquisition, and stress resilience. Understanding the genomic structure and motility of Comamonas endophytica 5MLIR can provide insights into its ecological role, particularly in symbiotic relationships with plants. The adaptability suggested by its three replicons may enhance its survival and functioning within diverse ecological niches. This adaptability could impact agricultural practices, particularly in fostering plant growth and health through beneficial microbial interactions. Overall, Comamonas endophytica 5MLIR exemplifies the intricate relationships between microorganisms and their plant hosts, highlighting the potential benefits of studying endophytic bacteria for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas endophytica
Strain5MLIR

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas endophytica 5MLIR, Complete Genome

Gene Summary

Adenine Count

611999 bp

Thymine Count

620995 bp

Guanine Count

1236916 bp

Cytosine Count

1240096 bp

Genome Length

3710006 bp

Protein-coding Genes

3269 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uracil-dna glycosylaseM9799_09505Q21SE9Positive2122046 - 212277125800.9
dmt family transporterM9799_09510A6WUW2Negative2122763 - 212366232657.9
abc transporter substrate-binding proteinM9799_09515P94421Positive2123897 - 212484734678.0
iron chelate uptake abc transporter family permease subunitM9799_09520P94418Positive2124828 - 212589537390.8
iron chelate uptake abc transporter family permease subunitM9799_09525P94419Positive2125957 - 212690134333.9
abc transporter atp-binding proteinM9799_09530P94420Positive2126898 - 212765627399.4
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaM9799_09535Q7NZD4Negative2127776 - 212886440142.0
hd-gyp domain-containing proteinM9799_09540Q9HWS0Negative2128984 - 213024346698.0
atp-dependent dna helicase recgM9799_09545Q8XD86Positive2130392 - 213251276894.5
lysr substrate-binding domain-containing proteinM9799_09550P71318Positive2132624 - 213358935712.3

Displaying genes 1901 – 1910 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.