Comamonas endophytica 5MLIR

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas endophytica 5MLIR is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This species is notable for its genomic structure, possessing three replicons, as indicated by its accession numbers CP106881.1, CP106882.1, and CP106883.1. These replicons suggest a complex genomic organization that may contribute to its adaptability and ecological interactions. The presence of flagella is crucial for the bacterium's movement and may facilitate its ability to colonize various environments, including plant tissues, where it can act as an endophyte. Endophytes are organisms that live within plant tissues without causing harm, and they can play significant roles in plant health, nutrient acquisition, and stress resilience. Understanding the genomic structure and motility of Comamonas endophytica 5MLIR can provide insights into its ecological role, particularly in symbiotic relationships with plants. The adaptability suggested by its three replicons may enhance its survival and functioning within diverse ecological niches. This adaptability could impact agricultural practices, particularly in fostering plant growth and health through beneficial microbial interactions. Overall, Comamonas endophytica 5MLIR exemplifies the intricate relationships between microorganisms and their plant hosts, highlighting the potential benefits of studying endophytic bacteria for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas endophytica
Strain5MLIR

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas endophytica 5MLIR, Complete Genome

Gene Summary

Adenine Count

611999 bp

Thymine Count

620995 bp

Guanine Count

1236916 bp

Cytosine Count

1240096 bp

Genome Length

3710006 bp

Protein-coding Genes

3269 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esci/ysci/hrpb family type iii secretion system inner rod proteinM9799_06105Not AvailablePositive1368981 - 136940014443.5
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhM9799_06110Q01251Positive1369397 - 136999921624.4
hypothetical proteinM9799_06115Not AvailablePositive1370203 - 137088024608.6
hrpe/yscl family type iii secretion apparatus proteinM9799_06120Q01253Positive1370850 - 137149123295.1
type iii secretion system atpase sctnM9799_06125P40290Positive1371521 - 137285548365.8
type iii secretion proteinM9799_06130Not AvailablePositive1372852 - 137335519146.3
hypothetical proteinM9799_06135Not AvailablePositive1373416 - 137478947516.7
type iii secretion system cytoplasmic ring protein sctqM9799_06140P42713Positive1374813 - 137594039189.4
type iii secretion system export apparatus subunit sctrM9799_06145P69980Positive1375937 - 137658423798.4
type iii secretion system export apparatus subunit sctsM9799_06150P69982Positive1376605 - 13768749778.23

Displaying genes 1221 – 1230 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.