Comamonas endophytica 5MLIR

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas endophytica 5MLIR is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This species is notable for its genomic structure, possessing three replicons, as indicated by its accession numbers CP106881.1, CP106882.1, and CP106883.1. These replicons suggest a complex genomic organization that may contribute to its adaptability and ecological interactions. The presence of flagella is crucial for the bacterium's movement and may facilitate its ability to colonize various environments, including plant tissues, where it can act as an endophyte. Endophytes are organisms that live within plant tissues without causing harm, and they can play significant roles in plant health, nutrient acquisition, and stress resilience. Understanding the genomic structure and motility of Comamonas endophytica 5MLIR can provide insights into its ecological role, particularly in symbiotic relationships with plants. The adaptability suggested by its three replicons may enhance its survival and functioning within diverse ecological niches. This adaptability could impact agricultural practices, particularly in fostering plant growth and health through beneficial microbial interactions. Overall, Comamonas endophytica 5MLIR exemplifies the intricate relationships between microorganisms and their plant hosts, highlighting the potential benefits of studying endophytic bacteria for ecological and agricultural advancements.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas endophytica
Strain5MLIR

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas endophytica 5MLIR, Complete Genome

Gene Summary

Adenine Count

611999 bp

Thymine Count

620995 bp

Guanine Count

1236916 bp

Cytosine Count

1240096 bp

Genome Length

3710006 bp

Protein-coding Genes

3269 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp2c family protein-serine/threonine phosphataseM9799_06005P37979Positive1350787 - 135283573880.4
hypothetical proteinM9799_06010Not AvailablePositive1352832 - 135360227625.2
mfs transporterM9799_06015Not AvailablePositive1353599 - 135612487315.5
abc transporter substrate-binding proteinM9799_06020Not AvailablePositive1356121 - 135718237878.0
escf/yscf/hrpa family type iii secretion system needle major subunitM9799_06025P95434Negative1357210 - 13574408305.08
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneM9799_06030Not AvailableNegative1357454 - 135776510826.0
type iii secretion system inner membrane ring subunit sctdM9799_06035Not AvailableNegative1357762 - 135920149978.8
stas domain-containing proteinM9799_06040Q7WLU9Positive1359351 - 135968312243.0
type iii secretion system export apparatus subunit sctvM9799_06045A1JU76Negative1359749 - 136185776573.5
hypothetical proteinM9799_06050Not AvailableNegative1361877 - 136230214936.0

Displaying genes 1201 – 1210 of 4109 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.