Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts alpha-glucoside transporter subunit iibc | DCX48_04540 | Q9AGA7 | Positive | 872322 - 873911 | 57381.2 |
| 6-phospho-alpha-glucosidase | DCX48_04545 | Q9AGA6 | Positive | 873914 - 875236 | 49123.9 |
| hemin-degrading factor | DCX48_04550 | Q56990 | Positive | 875443 - 876492 | 39929.8 |
| hemin abc transporter substrate-binding protein | DCX48_04555 | Q56991 | Positive | 876489 - 877307 | 28926.6 |
| iron abc transporter permease | DCX48_04560 | Q56992 | Positive | 877304 - 878308 | 35823.5 |
| heme abc transporter atp-binding protein | DCX48_04565 | Q6D645 | Positive | 878301 - 879098 | 29504.4 |
| ydiu family protein | DCX48_04570 | Q6D646 | Negative | 879118 - 880569 | 55424.4 |
| eal domain-containing protein | DCX48_04575 | P76204 | Negative | 880755 - 881480 | 27471.0 |
| gluconate transporter | DCX48_04580 | P39835 | Negative | 881691 - 883025 | 46360.9 |
| gluconokinase | DCX48_04585 | P39208 | Positive | 883322 - 883849 | 19217.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
