Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DCX48_17245 | P0C077 | Negative | 3649680 - 3649964 | 10908.5 |
| prevent-host-death protein | DCX48_17250 | Q47156 | Negative | 3649954 - 3650205 | 9079.83 |
| Dna primase | DCX48_17255 | P10277 | Negative | 3650465 - 3652792 | 84883.9 |
| Hypothetical protein | DCX48_17260 | P68666 | Negative | 3652803 - 3653144 | 12206.9 |
| hypothetical protein | DCX48_17265 | Not Available | Negative | 3653141 - 3653407 | 9672.61 |
| hypothetical protein | DCX48_17270 | Not Available | Negative | 3653404 - 3653598 | 6929.16 |
| Putative ci repressor | DCX48_17275 | P05462 | Negative | 3653591 - 3653788 | 7239.84 |
| Gp30 | DCX48_17280 | P05462 | Negative | 3653767 - 3654135 | 13465.5 |
| hypothetical protein | DCX48_17285 | Not Available | Negative | 3654144 - 3654368 | 7835.36 |
| Transcriptional regulator | DCX48_17290 | P12552 | Negative | 3654365 - 3654625 | 9677.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
