Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DCX48_12525 | P44239 | Positive | 2609279 - 2609629 | 12522.9 |
| Baseplate j family protein gp47 | DCX48_12530 | P44240 | Positive | 2609629 - 2610690 | 37496.6 |
| Tail protein | DCX48_12535 | P75982 | Positive | 2610687 - 2611259 | 21066.4 |
| Side tail fiber protein | DCX48_12540 | P33227 | Positive | 2611589 - 2612437 | 30331.5 |
| Tail fiber assembly protein | DCX48_12545 | Q47427 | Positive | 2612437 - 2613078 | 23684.5 |
| Gp245 | DCX48_12550 | Q6CZ34 | Negative | 2613551 - 2614324 | 28912.3 |
| Attl | Not Available | Not Available | Positive | 3646540 - 3646551 | Not Available |
| Dna primase | DCX48_17230 | P10277 | Negative | 3647820 - 3648199 | 14323.4 |
| hypothetical protein | DCX48_17235 | Not Available | Positive | 3648623 - 3649168 | 20875.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | DCX48_17240 | Not Available | Positive | 3649152 - 3649352 | 7497.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
