Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_02740 | Not Available | Positive | 456324 - 457703 | 49189.1 |
| virulence factor srfb | DCX48_02745 | Not Available | Positive | 457706 - 460693 | 112509.0 |
| virulence factor | DCX48_02750 | Not Available | Positive | 460690 - 463152 | 92072.9 |
| duf2358 domain-containing protein | DCX48_02755 | Not Available | Positive | 463410 - 463889 | 18429.1 |
| sdr family nad(p)-dependent oxidoreductase | DCX48_02760 | P25970 | Positive | 463886 - 464602 | 25651.4 |
| fad-dependent oxidoreductase | DCX48_02765 | Q7WT72 | Positive | 464608 - 465876 | 48226.1 |
| duf1365 domain-containing protein | DCX48_02770 | Not Available | Positive | 465869 - 466594 | 28224.3 |
| class i sam-dependent methyltransferase | DCX48_02775 | O53732 | Positive | 466591 - 467820 | 47325.3 |
| superoxide dismutase | DCX48_02780 | E8XDJ8 | Positive | 467875 - 468399 | 17848.4 |
| extracellular solute-binding protein | DCX48_02785 | O31518 | Negative | 468466 - 469785 | 48447.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
