Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_02690 | Not Available | Positive | 447048 - 447254 | 8098.05 |
| duf3811 domain-containing protein | DCX48_02695 | P32685 | Positive | 447787 - 448053 | 10480.4 |
| argp/lysg family dna-binding transcriptional regulator | DCX48_02700 | P67666 | Negative | 448050 - 448949 | 33307.1 |
| methyl-accepting chemotaxis protein | DCX48_02705 | P07017 | Negative | 449138 - 451111 | 70809.4 |
| gnat family n-acetyltransferase | DCX48_02710 | O32293 | Negative | 451281 - 451766 | 17461.7 |
| mfs transporter | DCX48_02715 | P75810 | Negative | 451916 - 453112 | 41783.3 |
| tetr family transcriptional regulator | DCX48_02720 | P75811 | Negative | 453249 - 453803 | 20807.9 |
| cytochrome b562 | DCX48_02725 | Q8ZAU2 | Negative | 453909 - 454304 | 14047.8 |
| osmc family peroxiredoxin | DCX48_02730 | P0C0L2 | Negative | 454583 - 455011 | 15168.1 |
| expansin-yoaj | DCX48_02735 | O34918 | Positive | 455345 - 456034 | 25221.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
