Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DCX48_02640 | Q01610 | Positive | 437949 - 438845 | 33322.3 |
| alpha/beta hydrolase | DCX48_02645 | P76049 | Positive | 439193 - 440086 | 31718.9 |
| nadh-dependent flavin oxidoreductase | DCX48_02650 | P54524 | Positive | 440099 - 441217 | 40067.7 |
| hypothetical protein | DCX48_02655 | Not Available | Negative | 441347 - 441529 | 7201.91 |
| hypothetical protein | DCX48_02660 | Not Available | Negative | 442282 - 442473 | 7172.93 |
| is630 family transposase | DCX48_02665 | P16943 | Positive | 442503 - 443276 | 30131.9 |
| hypothetical protein | DCX48_02670 | Not Available | Positive | 443278 - 444738 | 55580.2 |
| patatin | DCX48_02675 | Q6XGD4 | Positive | 444833 - 445780 | 35251.8 |
| integrase | DCX48_02680 | P24580 | Positive | 446120 - 446587 | 18372.5 |
| integrase | DCX48_02685 | P0CF79 | Positive | 446587 - 446754 | 6387.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
