Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative dna-binding protein | DCX48_12425 | Not Available | Positive | 2591161 - 2591661 | 18151.7 |
| hypothetical protein | DCX48_12430 | Not Available | Positive | 2591654 - 2591857 | 7550.8 |
| Hypothetical protein | DCX48_12435 | Not Available | Positive | 2591858 - 2593516 | 62014.1 |
| Portal protein | DCX48_12440 | P44225 | Positive | 2593520 - 2595088 | 57408.1 |
| Virion morphogenesis protein | DCX48_12445 | Q01259 | Positive | 2595075 - 2596415 | 49788.4 |
| Phage virion morphogenesis family protein | DCX48_12450 | P45255 | Positive | 2596540 - 2597082 | 20468.1 |
| Mu-like prophage i protein | DCX48_12455 | Q01267 | Positive | 2597317 - 2598456 | 40174.8 |
| Hypothetical protein | DCX48_12460 | Not Available | Positive | 2598449 - 2598844 | 13474.7 |
| Putative major head subunit protein | DCX48_12465 | Q9T1W1 | Positive | 2598856 - 2599773 | 33927.1 |
| hypothetical protein | DCX48_12470 | Not Available | Positive | 2599773 - 2600207 | 15491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
