Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_00490 | Not Available | Negative | 88304 - 88564 | 10103.9 |
| hypothetical protein | DCX48_00495 | Not Available | Positive | 88845 - 89024 | 7198.57 |
| hypothetical protein | DCX48_00500 | Not Available | Negative | 89092 - 90063 | 36342.4 |
| type ii toxin-antitoxin system hicb family antitoxin | DCX48_00505 | Not Available | Positive | 91139 - 91345 | 7355.53 |
| hypothetical protein | DCX48_00510 | Not Available | Positive | 91355 - 91690 | 12144.5 |
| phage integrase family protein | DCX48_00515 | P06615 | Positive | 91687 - 92472 | 28819.2 |
| duf1173 family protein | DCX48_00520 | Not Available | Positive | 92485 - 93870 | 53842.2 |
| copg family transcriptional regulator | DCX48_00525 | Not Available | Negative | 93959 - 94240 | 10442.5 |
| chromosome partitioning protein para | DCX48_00530 | Q9K5N0 | Negative | 94240 - 94878 | 23380.1 |
| stba family protein | DCX48_00535 | P11904 | Positive | 95115 - 96089 | 35558.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
