Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein pilp | DCX48_00340 | Not Available | Negative | 62333 - 62827 | 17198.7 |
| pilus assembly protein pilo | DCX48_00345 | Not Available | Negative | 62811 - 64109 | 48107.9 |
| piln family type ivb pilus formation outer membrane protein | DCX48_00350 | Q9S142 | Negative | 64111 - 65802 | 59884.9 |
| pilus assembly protein pilp | DCX48_00355 | Not Available | Negative | 65817 - 66254 | 16186.5 |
| pili assembly chaperone | DCX48_00360 | Not Available | Negative | 66254 - 67420 | 41651.1 |
| hypothetical protein | DCX48_00365 | Not Available | Negative | 67442 - 67972 | 19340.3 |
| hypothetical protein | DCX48_00370 | Not Available | Negative | 67969 - 68565 | 21672.4 |
| hypothetical protein | DCX48_00375 | Not Available | Negative | 69599 - 70270 | 25923.9 |
| transcription termination factor nusg | DCX48_00380 | Not Available | Negative | 70520 - 71029 | 19706.8 |
| conjugal transfer protein traa | DCX48_00385 | P0C0Z1 | Negative | 71293 - 71577 | 10627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
