Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_00190 | Not Available | Negative | 25862 - 26515 | 24379.3 |
| conjugal transfer protein trbc | DCX48_00195 | Q5ZYC6 | Negative | 26505 - 28811 | 87455.9 |
| hypothetical protein | DCX48_00200 | Not Available | Negative | 28814 - 30076 | 45109.5 |
| conjugal transfer protein trba | DCX48_00205 | Q5ZYC7 | Negative | 30132 - 31349 | 46472.4 |
| ethanolamine utilization protein eute | DCX48_00210 | P05839 | Negative | 31689 - 32321 | 24259.7 |
| hypothetical protein | DCX48_00215 | Not Available | Negative | 32384 - 34501 | 74599.3 |
| conjugal transfer protein trax | DCX48_00220 | Not Available | Negative | 34673 - 35083 | 15495.6 |
| conjugal transfer protein | DCX48_00225 | Not Available | Negative | 35209 - 36411 | 42892.3 |
| atp-binding protein | DCX48_00230 | Not Available | Negative | 36995 - 40048 | 114543.0 |
| conjugal transfer protein trat | DCX48_00235 | Not Available | Negative | 40174 - 40992 | 30919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
