Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1456 family protein | DCX48_00140 | Not Available | Positive | 17100 - 17558 | 16325.4 |
| ardk family transcriptional regulator | DCX48_00145 | Not Available | Positive | 17917 - 18219 | 11499.0 |
| hypothetical protein | DCX48_00150 | Not Available | Positive | 19382 - 19645 | 9996.29 |
| hypothetical protein | DCX48_00155 | Not Available | Positive | 19679 - 19915 | 9134.76 |
| xre family transcriptional regulator | DCX48_00160 | Not Available | Negative | 19953 - 20210 | 10276.3 |
| duf4942 domain-containing protein | DCX48_00165 | Not Available | Positive | 20723 - 20902 | 6650.0 |
| duf4942 domain-containing protein | DCX48_00170 | Not Available | Positive | 20930 - 21220 | 11119.2 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | DCX48_00175 | Not Available | Negative | 22077 - 22379 | 11267.7 |
| ribbon-helix-helix protein, copg family | DCX48_00180 | Not Available | Positive | 22611 - 22946 | 12746.3 |
| relaxase nikb | DCX48_00185 | P22898 | Positive | 22969 - 25671 | 103817.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
