Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCX48_00040 | Not Available | Positive | 3424 - 3822 | 14714.6 |
| hypothetical protein | DCX48_00045 | Not Available | Negative | 3868 - 4263 | 15124.9 |
| hypothetical protein | DCX48_00050 | Not Available | Positive | 4763 - 5092 | 12197.7 |
| hypothetical protein | DCX48_00055 | Not Available | Positive | 5110 - 6294 | 44504.0 |
| hypothetical protein | DCX48_00060 | Not Available | Positive | 6390 - 6617 | 8190.37 |
| type ii toxin-antitoxin system mqsr family toxin | DCX48_00065 | Q46865 | Positive | 6622 - 6918 | 10807.1 |
| ygit-type zinc finger protein | DCX48_00070 | Q46864 | Positive | 6920 - 7315 | 14655.6 |
| antirestriction protein arda | DCX48_00075 | Not Available | Positive | 7888 - 8391 | 19368.5 |
| duf4942 domain-containing protein | DCX48_00080 | Not Available | Positive | 9038 - 9934 | 33452.1 |
| hypothetical protein | DCX48_00085 | Not Available | Negative | 10269 - 10493 | 7898.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
