Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium atrosepticum |
| Strain | G/39, G39 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 27 |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Beta vulgaris subsp. vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1203999 bp
Thymine Count
1202297 bp
Guanine Count
1258344 bp
Cytosine Count
1258759 bp
Genome Length
4923399 bp
Protein-coding Genes
4302 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | DCX48_22870 | Q08870 | Positive | 4919008 - 4919853 | 30390.0 |
| methionine abc transporter atp-binding protein | DCX48_22875 | Q6D3Q6 | Positive | 4919935 - 4920951 | 36361.3 |
| abc transporter permease | DCX48_22880 | Q9KTJ6 | Positive | 4920944 - 4921603 | 23419.5 |
| serine-type d-ala-d-ala carboxypeptidase | DCX48_22885 | P08506 | Positive | 4921889 - 4923094 | 43751.5 |
| hypothetical protein | DCX48_00010 | P10032 | Positive | 520 - 963 | 16793.9 |
| plasmid sos inhibition protein a | DCX48_00015 | P17976 | Positive | 960 - 1697 | 28822.7 |
| hypothetical protein | DCX48_00020 | Not Available | Positive | 1690 - 1875 | 6974.36 |
| hypothetical protein | DCX48_00025 | Not Available | Positive | 1885 - 2166 | 10451.5 |
| hypothetical protein | DCX48_00030 | Not Available | Positive | 2172 - 2963 | 29775.0 |
| hypothetical protein | DCX48_00035 | Not Available | Positive | 2986 - 3357 | 13627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
